Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015885851.1_cds_XP_016439944.1_35450
CDS Infomation

[gene=LOC107765771] [db_xref=GeneID:107765771] [protein=probable galacturonosyltransferase 7] [protein_id=XP_016439944.1] [location=join(32962..33103,33649..33680,33770..33826,34038..34097,34910..34955,35276..35322,35446..35547,35658..35956,36743..37100,37193..37726,42085..42348)] [gbkey=CDS]
Sequence

ATGAAGGGTGGAATAGGAGGTTCTCTTCCGGCTAAGAGGCGATGGAAAGGTTTCGTAATT
GCGGTTTTGGGCCTCGTTTTGCTTTCATTGCTCGTGCCTCTCGTCTTTCTGCTTGGCCTC
CATAACGGTTTCCACTCTTCTGGATTTTCAACAGCACAACAAAGTTCATCCGCAAGTGGA
GTTAGAGTCTACAGTCGACATAGTACTGCTAAGAATGGGAGTCAGTCGGAGGGTGATGAA
TCAAAACACATGGATGACCTAATGAGAAGATTGGAACCAACTTTTTCCAAGGATATTAGG
GAAAATTTTGTTGGGGAAGCGGAGAACAAGACTGCTGGCTCTCCTTTGTTGGATGGGTTG
CCCAAAGAACGCCCCAGAGCAAATAGCACAGGTGCTGCTGCTATGCATGCTGCCACTGAG
AATATCAAAGGCATTGACGGCTCTCCTATGTTGGATGGGTTGCCCAAAGAACGCTCAAGA
GCAAACAGCACAAGTGTTGGTGCTATGCATGCTGCCACTGGGAATATCAAAGGCATTGAC
GAGGGTGAGAAATTATGTGAGCTAAAATTTGGGAGCTATTGTTTATGGCGTCGCAATCAT
AAGGAAAAAGTGAATGATTTCACTGTGAGAAAGATGAAAGACTTGTTATATGTGGCCCGG
GCTTATTATCCTAGCATTGCGAAGCTTCCGGCTCTTGACAAGCTGTCGCAGGAAATGAAG
CAAAACATTCAAGAGTTTGAGCGGGTGCTCAGTGTAACTACGATAGACAAAGATCTTCCC
CCTCTGATTGATCAGAAGTTAACTAAGATGGAAGCTGTAATTGCTCAAGCAAAGGCGTGC
CGTGTAGATTGTAGTAACGTAGACAAGAAATTCAGACAGCTAGTTGATCTAACTGAAGAT
GAAGCTACTTTCCATATGAGACAGAGTGCCTTCCTCTACCAACTAGCAGTTCAAACCATG
CCCAAGAGTCATCATTGCTTGTCAATGCGACTAACTGTAGAGTATTTTAGAGACCCTTCA
CCTGATATCGATCAGTCATTGGCAGAGAGACATTTGAATCCAGATCTTCACCACTTTGTT
ATATTCTCCAACAATGTGCTGGCATCATCTGCCGTAATTAACTCCACTGTAATGCATGCT
AAAGAAAGTGAGAGTCAAGTATTTCATGTGGTAACAGATAGACAGAATTACTTTGCCATG
AAGTTATGGTTCTCGAGGAACAAGTATATGGAGGCCACAGTTGAGGTGTTGAATATTGAA
GATGTTAAGCTGGACAACAATAAGGCATCAACGTCAATTCATCTTTCCCTGCCTGATGAA
TATCGTGTCTCCTTCCACAAGGTTGATAAACCATCTACAACAGAATACTTATCTGTTTTT
TCGCATTCCCATTATCTTCTTCCCAAGATATTCCATAGTTTGAAGAAAGTAGTTGTCTTG
GATGATGACGTTATTGTGCAAAGAGACTTGTCAGACTTATGGGGCATCGATATGGACGGG
AAAGTGAATGGTGCGGTGCAGTCTTGCTCAGTTCGGCTGGTTCAGCTGAGGAAACTTTTT
GGTAGCAAGAGAGTGGATGAAACATCTTGTGCTTGGATGTCTGGATTAAATGTTGTTGAT
CTAGTGAGGTGGAGGGAACGAGATATTTCCGGAAGATACCTAAAGCTGGTAAAGGAGATG
AATTCAGAAGAGGCTGTTACATTGCGCGCAAGCTTGCTTACTTTTCAGGGTGAAGTCTAT
GCTCTTGATGATAAGTGGGTATTATCAGGATTGGGTCATAAATATGGAGTGGATAGTGAA
ACTGTGAAGAATGCAAGAGTACTGCATTTTAATGGTAAAATGAAACCCTGGCTTGAGTTG
GGAATCCATGATTATACAGTTTTCTGGCGGAAGTTTGTAGACCCGGAGAATCAGTTTTTA
AGTGATTGCAATATTAACTAG

Peptide Sequence

PEP ID

XP_016439944.1
PEP Infomation

PREDICTED: probable galacturonosyltransferase 7 [Nicotiana tabacum]
Sequence

MKGGIGGSLPAKRRWKGFVIAVLGLVLLSLLVPLVFLLGLHNGFHSSGFSTAQQSSSASG
VRVYSRHSTAKNGSQSEGDESKHMDDLMRRLEPTFSKDIRENFVGEAENKTAGSPLLDGL
PKERPRANSTGAAAMHAATENIKGIDGSPMLDGLPKERSRANSTSVGAMHAATGNIKGID
EGEKLCELKFGSYCLWRRNHKEKVNDFTVRKMKDLLYVARAYYPSIAKLPALDKLSQEMK
QNIQEFERVLSVTTIDKDLPPLIDQKLTKMEAVIAQAKACRVDCSNVDKKFRQLVDLTED
EATFHMRQSAFLYQLAVQTMPKSHHCLSMRLTVEYFRDPSPDIDQSLAERHLNPDLHHFV
IFSNNVLASSAVINSTVMHAKESESQVFHVVTDRQNYFAMKLWFSRNKYMEATVEVLNIE
DVKLDNNKASTSIHLSLPDEYRVSFHKVDKPSTTEYLSVFSHSHYLLPKIFHSLKKVVVL
DDDVIVQRDLSDLWGIDMDGKVNGAVQSCSVRLVQLRKLFGSKRVDETSCAWMSGLNVVD
LVRWRERDISGRYLKLVKEMNSEEAVTLRASLLTFQGEVYALDDKWVLSGLGHKYGVDSE
TVKNARVLHFNGKMKPWLELGIHDYTVFWRKFVDPENQFLSDCNIN

Transcript Sequence

Gene sequence data has not been registered.